Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.63■□□□□ 0.41
VimP20152 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.63■□□□□ 0.41
VimP20152 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VimP20152 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VimP20152 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VimP20152 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.62■□□□□ 0.41
VimP20152 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.62■□□□□ 0.41
VimP20152 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
VimP20152 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Gm5812-201ENSMUST00000061073 957 ntBASIC17.62■□□□□ 0.41
VimP20152 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.62■□□□□ 0.41
VimP20152 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
VimP20152 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VimP20152 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.62■□□□□ 0.41
VimP20152 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.61■□□□□ 0.41
VimP20152 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VimP20152 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VimP20152 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VimP20152 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.61■□□□□ 0.41
VimP20152 Gm12251-201ENSMUST00000117893 792 ntBASIC17.61■□□□□ 0.41
VimP20152 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VimP20152 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.61■□□□□ 0.41
VimP20152 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VimP20152 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VimP20152 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VimP20152 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.61■□□□□ 0.41
VimP20152 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VimP20152 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VimP20152 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VimP20152 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VimP20152 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
VimP20152 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VimP20152 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VimP20152 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VimP20152 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VimP20152 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VimP20152 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VimP20152 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.6■□□□□ 0.41
VimP20152 Smad6-203ENSMUST00000179458 273 ntBASIC17.6■□□□□ 0.41
VimP20152 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.6■□□□□ 0.41
VimP20152 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VimP20152 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VimP20152 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VimP20152 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VimP20152 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VimP20152 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VimP20152 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VimP20152 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VimP20152 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VimP20152 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.59■□□□□ 0.41
VimP20152 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VimP20152 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VimP20152 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VimP20152 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
VimP20152 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VimP20152 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
VimP20152 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.59■□□□□ 0.41
VimP20152 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VimP20152 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VimP20152 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.59■□□□□ 0.41
VimP20152 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.59■□□□□ 0.41
VimP20152 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VimP20152 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VimP20152 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VimP20152 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VimP20152 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VimP20152 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VimP20152 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
VimP20152 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VimP20152 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
VimP20152 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VimP20152 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VimP20152 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VimP20152 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VimP20152 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VimP20152 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VimP20152 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VimP20152 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VimP20152 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VimP20152 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VimP20152 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VimP20152 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VimP20152 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms