Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmga1P17095 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmga1P17095 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmga1P17095 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmga1P17095 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmga1P17095 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmga1P17095 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.66■□□□□ 0.42
Hmga1P17095 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmga1P17095 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmga1P17095 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.66■□□□□ 0.42
Hmga1P17095 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hmga1P17095 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmga1P17095 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmga1P17095 Gm11355-201ENSMUST00000121120 306 ntBASIC17.65■□□□□ 0.42
Hmga1P17095 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hmga1P17095 Gm27000-201ENSMUST00000182943 842 ntBASIC17.65■□□□□ 0.42
Hmga1P17095 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.65■□□□□ 0.42
Hmga1P17095 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmga1P17095 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmga1P17095 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hmga1P17095 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.65■□□□□ 0.42
Hmga1P17095 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmga1P17095 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Hmga1P17095 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.64■□□□□ 0.42
Hmga1P17095 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmga1P17095 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Hmga1P17095 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmga1P17095 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Hmga1P17095 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.64■□□□□ 0.41
Hmga1P17095 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Hmga1P17095 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.64■□□□□ 0.41
Hmga1P17095 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmga1P17095 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmga1P17095 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmga1P17095 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.63■□□□□ 0.41
Hmga1P17095 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.63■□□□□ 0.41
Hmga1P17095 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.63■□□□□ 0.41
Hmga1P17095 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.63■□□□□ 0.41
Hmga1P17095 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.63■□□□□ 0.41
Hmga1P17095 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hmga1P17095 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hmga1P17095 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmga1P17095 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hmga1P17095 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Gm29518-201ENSMUST00000190858 372 ntBASIC17.62■□□□□ 0.41
Hmga1P17095 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Hmga1P17095 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hmga1P17095 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hmga1P17095 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hmga1P17095 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmga1P17095 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hmga1P17095 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmga1P17095 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmga1P17095 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hmga1P17095 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmga1P17095 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmga1P17095 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmga1P17095 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmga1P17095 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmga1P17095 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmga1P17095 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hmga1P17095 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmga1P17095 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmga1P17095 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Hmga1P17095 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmga1P17095 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmga1P17095 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hmga1P17095 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.6■□□□□ 0.41
Hmga1P17095 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmga1P17095 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Hmga1P17095 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms