Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccl3P10855 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.26■□□□□ 0.03
Ccl3P10855 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccl3P10855 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccl3P10855 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccl3P10855 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccl3P10855 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccl3P10855 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccl3P10855 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccl3P10855 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccl3P10855 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.25■□□□□ 0.03
Ccl3P10855 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ccl3P10855 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ccl3P10855 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.25■□□□□ 0.03
Ccl3P10855 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ccl3P10855 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ccl3P10855 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccl3P10855 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ccl3P10855 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccl3P10855 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ccl3P10855 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Ccl3P10855 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccl3P10855 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccl3P10855 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccl3P10855 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.24■□□□□ 0.03
Ccl3P10855 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ccl3P10855 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccl3P10855 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccl3P10855 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Ccl3P10855 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccl3P10855 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccl3P10855 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ccl3P10855 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccl3P10855 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ccl3P10855 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccl3P10855 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccl3P10855 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccl3P10855 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccl3P10855 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccl3P10855 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccl3P10855 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccl3P10855 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccl3P10855 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ccl3P10855 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccl3P10855 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ccl3P10855 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccl3P10855 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Ccl3P10855 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccl3P10855 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccl3P10855 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccl3P10855 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccl3P10855 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccl3P10855 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccl3P10855 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccl3P10855 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccl3P10855 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccl3P10855 Gm15794-201ENSMUST00000120182 631 ntBASIC15.22■□□□□ 0.03
Ccl3P10855 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.22■□□□□ 0.03
Ccl3P10855 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccl3P10855 Gm34391-201ENSMUST00000203706 907 ntBASIC15.22■□□□□ 0.03
Ccl3P10855 Mzt1-203ENSMUST00000227948 952 ntBASIC15.22■□□□□ 0.03
Ccl3P10855 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccl3P10855 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccl3P10855 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccl3P10855 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccl3P10855 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccl3P10855 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccl3P10855 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccl3P10855 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ccl3P10855 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccl3P10855 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccl3P10855 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccl3P10855 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccl3P10855 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccl3P10855 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ccl3P10855 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccl3P10855 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccl3P10855 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccl3P10855 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Ccl3P10855 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Ccl3P10855 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Ccl3P10855 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Ccl3P10855 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.21■□□□□ 0.03
Ccl3P10855 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccl3P10855 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms