Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
P06328 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P06328 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.65□□□□□ -0.38
P06328 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.65□□□□□ -0.38
P06328 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
P06328 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
P06328 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.65□□□□□ -0.38
P06328 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.65□□□□□ -0.38
P06328 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
P06328 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P06328 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.65□□□□□ -0.38
P06328 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
P06328 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.64□□□□□ -0.39
P06328 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.64□□□□□ -0.39
P06328 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.64□□□□□ -0.39
P06328 Gm11643-201ENSMUST00000119578 864 ntBASIC12.64□□□□□ -0.39
P06328 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
P06328 Mir6349-201ENSMUST00000184059 97 ntBASIC12.64□□□□□ -0.39
P06328 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.64□□□□□ -0.39
P06328 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.64□□□□□ -0.39
P06328 Gm5408-201ENSMUST00000197998 747 ntBASIC12.64□□□□□ -0.39
P06328 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
P06328 Gm4968-201ENSMUST00000071458 858 ntBASIC12.64□□□□□ -0.39
P06328 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
P06328 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.64□□□□□ -0.39
P06328 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
P06328 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.64□□□□□ -0.39
P06328 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.64□□□□□ -0.39
P06328 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
P06328 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P06328 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P06328 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P06328 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.63□□□□□ -0.39
P06328 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P06328 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.63□□□□□ -0.39
P06328 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P06328 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
P06328 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P06328 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
P06328 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P06328 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.63□□□□□ -0.39
P06328 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.63□□□□□ -0.39
P06328 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P06328 Gm2559-201ENSMUST00000201323 363 ntBASIC12.63□□□□□ -0.39
P06328 Gm10138-203ENSMUST00000206952 366 ntBASIC12.63□□□□□ -0.39
P06328 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.63□□□□□ -0.39
P06328 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P06328 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P06328 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P06328 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
P06328 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
P06328 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.62□□□□□ -0.39
P06328 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
P06328 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Gm12933-201ENSMUST00000120203 872 ntBASIC12.62□□□□□ -0.39
P06328 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.62□□□□□ -0.39
P06328 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms