Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.85■□□□□ 0.45
CopeO89079 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CopeO89079 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CopeO89079 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CopeO89079 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CopeO89079 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CopeO89079 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CopeO89079 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CopeO89079 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CopeO89079 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CopeO89079 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.84■□□□□ 0.45
CopeO89079 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CopeO89079 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CopeO89079 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CopeO89079 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CopeO89079 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CopeO89079 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CopeO89079 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CopeO89079 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CopeO89079 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CopeO89079 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CopeO89079 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CopeO89079 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.83■□□□□ 0.44
CopeO89079 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CopeO89079 Mir2861-201ENSMUST00000175539 82 ntBASIC17.83■□□□□ 0.44
CopeO89079 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.83■□□□□ 0.44
CopeO89079 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CopeO89079 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CopeO89079 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CopeO89079 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.83■□□□□ 0.44
CopeO89079 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CopeO89079 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CopeO89079 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CopeO89079 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CopeO89079 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CopeO89079 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CopeO89079 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CopeO89079 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CopeO89079 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CopeO89079 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CopeO89079 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CopeO89079 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.82■□□□□ 0.44
CopeO89079 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CopeO89079 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CopeO89079 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CopeO89079 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CopeO89079 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CopeO89079 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.82■□□□□ 0.44
CopeO89079 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CopeO89079 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CopeO89079 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CopeO89079 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CopeO89079 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CopeO89079 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CopeO89079 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Gm13401-201ENSMUST00000117074 291 ntBASIC17.81■□□□□ 0.44
CopeO89079 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CopeO89079 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CopeO89079 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.81■□□□□ 0.44
CopeO89079 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CopeO89079 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CopeO89079 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CopeO89079 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CopeO89079 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CopeO89079 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CopeO89079 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.8■□□□□ 0.44
CopeO89079 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CopeO89079 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.8■□□□□ 0.44
CopeO89079 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.8■□□□□ 0.44
CopeO89079 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.8■□□□□ 0.44
CopeO89079 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.8■□□□□ 0.44
CopeO89079 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CopeO89079 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms