Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.73■□□□□ 0.43
Syn1O88935 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.73■□□□□ 0.43
Syn1O88935 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.73■□□□□ 0.43
Syn1O88935 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.73■□□□□ 0.43
Syn1O88935 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syn1O88935 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.73■□□□□ 0.43
Syn1O88935 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syn1O88935 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Syn1O88935 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syn1O88935 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Syn1O88935 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Syn1O88935 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Syn1O88935 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syn1O88935 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Golph3-205ENSMUST00000228671 2842 ntBASIC17.72■□□□□ 0.43
Syn1O88935 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Syn1O88935 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.72■□□□□ 0.43
Syn1O88935 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.72■□□□□ 0.43
Syn1O88935 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.72■□□□□ 0.43
Syn1O88935 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.72■□□□□ 0.43
Syn1O88935 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.72■□□□□ 0.43
Syn1O88935 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Syn1O88935 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Syn1O88935 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syn1O88935 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syn1O88935 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syn1O88935 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Syn1O88935 Gm27702-201ENSMUST00000184512 56 ntBASIC17.71■□□□□ 0.43
Syn1O88935 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.71■□□□□ 0.43
Syn1O88935 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.71■□□□□ 0.43
Syn1O88935 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syn1O88935 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Syn1O88935 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syn1O88935 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syn1O88935 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syn1O88935 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Syn1O88935 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Syn1O88935 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syn1O88935 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syn1O88935 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.7■□□□□ 0.42
Syn1O88935 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.7■□□□□ 0.42
Syn1O88935 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syn1O88935 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syn1O88935 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Syn1O88935 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.7■□□□□ 0.42
Syn1O88935 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syn1O88935 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Syn1O88935 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syn1O88935 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syn1O88935 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.7■□□□□ 0.42
Syn1O88935 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.7■□□□□ 0.42
Syn1O88935 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syn1O88935 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syn1O88935 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syn1O88935 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.69■□□□□ 0.42
Syn1O88935 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Syn1O88935 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Syn1O88935 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syn1O88935 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syn1O88935 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syn1O88935 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.69■□□□□ 0.42
Syn1O88935 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Syn1O88935 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.69■□□□□ 0.42
Syn1O88935 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.69■□□□□ 0.42
Syn1O88935 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.69■□□□□ 0.42
Syn1O88935 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syn1O88935 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syn1O88935 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Syn1O88935 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syn1O88935 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Syn1O88935 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Syn1O88935 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Syn1O88935 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syn1O88935 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Syn1O88935 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syn1O88935 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Syn1O88935 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Syn1O88935 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syn1O88935 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Syn1O88935 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syn1O88935 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Syn1O88935 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syn1O88935 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Syn1O88935 Rps4l-201ENSMUST00000071745 943 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms