Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Apba3O88888 Gm6345-202ENSMUST00000180900 204 ntBASIC18.88■□□□□ 0.61
Apba3O88888 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Apba3O88888 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Apba3O88888 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Apba3O88888 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Apba3O88888 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.88■□□□□ 0.61
Apba3O88888 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Apba3O88888 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Apba3O88888 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Apba3O88888 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Apba3O88888 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Apba3O88888 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Apba3O88888 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.87■□□□□ 0.61
Apba3O88888 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.87■□□□□ 0.61
Apba3O88888 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.87■□□□□ 0.61
Apba3O88888 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.87■□□□□ 0.61
Apba3O88888 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Apba3O88888 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Apba3O88888 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Apba3O88888 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Apba3O88888 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Apba3O88888 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Apba3O88888 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.87■□□□□ 0.61
Apba3O88888 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Apba3O88888 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Apba3O88888 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Apba3O88888 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.86■□□□□ 0.61
Apba3O88888 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Apba3O88888 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.86■□□□□ 0.61
Apba3O88888 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Apba3O88888 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Apba3O88888 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.86■□□□□ 0.61
Apba3O88888 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Apba3O88888 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.86■□□□□ 0.61
Apba3O88888 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Apba3O88888 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Apba3O88888 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.86■□□□□ 0.61
Apba3O88888 Gm21559-201ENSMUST00000220638 855 ntBASIC18.86■□□□□ 0.61
Apba3O88888 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Apba3O88888 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Apba3O88888 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Apba3O88888 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Apba3O88888 Gm8587-201ENSMUST00000076538 843 ntBASIC18.86■□□□□ 0.61
Apba3O88888 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Apba3O88888 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Apba3O88888 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Apba3O88888 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Apba3O88888 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Apba3O88888 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Apba3O88888 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Apba3O88888 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.85■□□□□ 0.61
Apba3O88888 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Apba3O88888 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Apba3O88888 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Apba3O88888 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Apba3O88888 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Apba3O88888 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Apba3O88888 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Apba3O88888 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Apba3O88888 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Apba3O88888 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Apba3O88888 Gm21362-201ENSMUST00000194272 928 ntBASIC18.84■□□□□ 0.61
Apba3O88888 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Apba3O88888 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Apba3O88888 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Apba3O88888 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Apba3O88888 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Apba3O88888 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Apba3O88888 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Apba3O88888 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Apba3O88888 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.84■□□□□ 0.61
Apba3O88888 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Apba3O88888 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Apba3O88888 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Apba3O88888 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Apba3O88888 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Apba3O88888 Mir1668-201ENSMUST00000184114 107 ntBASIC18.83■□□□□ 0.6
Apba3O88888 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.83■□□□□ 0.6
Apba3O88888 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Apba3O88888 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.83■□□□□ 0.6
Apba3O88888 Gm7367-201ENSMUST00000057611 492 ntBASIC18.83■□□□□ 0.6
Apba3O88888 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Apba3O88888 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Apba3O88888 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms