Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cldn1O88551 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cldn1O88551 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
Cldn1O88551 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.78□□□□□ -0.04
Cldn1O88551 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cldn1O88551 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cldn1O88551 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cldn1O88551 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cldn1O88551 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cldn1O88551 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cldn1O88551 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cldn1O88551 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.77□□□□□ -0.05
Cldn1O88551 Gm27389-201ENSMUST00000183622 195 ntBASIC14.77□□□□□ -0.05
Cldn1O88551 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.77□□□□□ -0.05
Cldn1O88551 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn1O88551 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn1O88551 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn1O88551 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn1O88551 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Cldn1O88551 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.77□□□□□ -0.05
Cldn1O88551 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn1O88551 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn1O88551 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn1O88551 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn1O88551 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn1O88551 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.77□□□□□ -0.05
Cldn1O88551 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn1O88551 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn1O88551 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn1O88551 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.76□□□□□ -0.05
Cldn1O88551 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Gm13474-201ENSMUST00000122466 815 ntBASIC14.76□□□□□ -0.05
Cldn1O88551 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.76□□□□□ -0.05
Cldn1O88551 Gm9013-201ENSMUST00000132939 882 ntBASIC14.76□□□□□ -0.05
Cldn1O88551 Gm25925-201ENSMUST00000158314 306 ntBASIC14.76□□□□□ -0.05
Cldn1O88551 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Gm4974-201ENSMUST00000209974 875 ntBASIC14.76□□□□□ -0.05
Cldn1O88551 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.76□□□□□ -0.05
Cldn1O88551 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn1O88551 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cldn1O88551 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cldn1O88551 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cldn1O88551 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 BC021767-201ENSMUST00000126387 1716 ntBASIC14.75□□□□□ -0.05
Cldn1O88551 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cldn1O88551 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cldn1O88551 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.75□□□□□ -0.05
Cldn1O88551 Gm7791-201ENSMUST00000219066 539 ntBASIC14.75□□□□□ -0.05
Cldn1O88551 Gm7370-201ENSMUST00000219471 767 ntBASIC14.75□□□□□ -0.05
Cldn1O88551 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cldn1O88551 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.75□□□□□ -0.05
Cldn1O88551 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.75□□□□□ -0.05
Cldn1O88551 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cldn1O88551 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldn1O88551 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.74□□□□□ -0.05
Cldn1O88551 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.74□□□□□ -0.05
Cldn1O88551 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms