Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm45328-201ENSMUST00000210942 917 ntBASIC16.4■□□□□ 0.22
Tgfbr3O88393 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tgfbr3O88393 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tgfbr3O88393 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tgfbr3O88393 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tgfbr3O88393 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tgfbr3O88393 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tgfbr3O88393 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.4■□□□□ 0.22
Tgfbr3O88393 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tgfbr3O88393 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.39■□□□□ 0.21
Tgfbr3O88393 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tgfbr3O88393 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tgfbr3O88393 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.38■□□□□ 0.21
Tgfbr3O88393 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tgfbr3O88393 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Mir8112-201ENSMUST00000184382 131 ntBASIC16.38■□□□□ 0.21
Tgfbr3O88393 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Tgfbr3O88393 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tgfbr3O88393 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tgfbr3O88393 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tgfbr3O88393 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tgfbr3O88393 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tgfbr3O88393 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tgfbr3O88393 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tgfbr3O88393 Gm24589-201ENSMUST00000116692 94 ntBASIC16.37■□□□□ 0.21
Tgfbr3O88393 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.37■□□□□ 0.21
Tgfbr3O88393 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tgfbr3O88393 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tgfbr3O88393 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tgfbr3O88393 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tgfbr3O88393 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Tgfbr3O88393 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tgfbr3O88393 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.37■□□□□ 0.21
Tgfbr3O88393 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tgfbr3O88393 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tgfbr3O88393 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tgfbr3O88393 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tgfbr3O88393 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tgfbr3O88393 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.36■□□□□ 0.21
Tgfbr3O88393 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Tgfbr3O88393 Olfr129-201ENSMUST00000122318 993 ntBASIC16.36■□□□□ 0.21
Tgfbr3O88393 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tgfbr3O88393 Gm18115-201ENSMUST00000221209 621 ntBASIC16.36■□□□□ 0.21
Tgfbr3O88393 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tgfbr3O88393 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tgfbr3O88393 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tgfbr3O88393 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.36■□□□□ 0.21
Tgfbr3O88393 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.36■□□□□ 0.21
Tgfbr3O88393 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tgfbr3O88393 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tgfbr3O88393 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Tgfbr3O88393 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.35■□□□□ 0.21
Tgfbr3O88393 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tgfbr3O88393 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.35■□□□□ 0.21
Tgfbr3O88393 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.35■□□□□ 0.21
Tgfbr3O88393 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Tgfbr3O88393 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.35■□□□□ 0.21
Tgfbr3O88393 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tgfbr3O88393 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.35■□□□□ 0.21
Tgfbr3O88393 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tgfbr3O88393 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.35■□□□□ 0.21
Tgfbr3O88393 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tgfbr3O88393 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tgfbr3O88393 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tgfbr3O88393 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tgfbr3O88393 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.35■□□□□ 0.21
Tgfbr3O88393 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tgfbr3O88393 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tgfbr3O88393 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.34■□□□□ 0.21
Tgfbr3O88393 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tgfbr3O88393 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tgfbr3O88393 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.34■□□□□ 0.21
Tgfbr3O88393 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.34■□□□□ 0.21
Tgfbr3O88393 Gm44771-201ENSMUST00000206975 626 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms