Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC10.54□□□□□ -0.72
Gm10139O88245 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10139O88245 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm10139O88245 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Gm10139O88245 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10139O88245 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10139O88245 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10139O88245 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10139O88245 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10139O88245 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10139O88245 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10139O88245 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10139O88245 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC10.53□□□□□ -0.72
Gm10139O88245 Gm3807-201ENSMUST00000193520 1168 ntBASIC10.53□□□□□ -0.72
Gm10139O88245 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Gm10139O88245 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Gm10139O88245 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10139O88245 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10139O88245 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10139O88245 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Gm10139O88245 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Gm10139O88245 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Gm10139O88245 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Gm10139O88245 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Gm10139O88245 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
Gm10139O88245 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm10139O88245 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm10139O88245 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC10.52□□□□□ -0.73
Gm10139O88245 Gm11249-201ENSMUST00000117071 859 ntBASIC10.52□□□□□ -0.73
Gm10139O88245 Gm12896-201ENSMUST00000118430 226 ntBASIC10.52□□□□□ -0.73
Gm10139O88245 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm10139O88245 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC10.52□□□□□ -0.73
Gm10139O88245 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm10139O88245 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC10.52□□□□□ -0.73
Gm10139O88245 AC166341.7-201ENSMUST00000221698 126 ntBASIC10.52□□□□□ -0.73
Gm10139O88245 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Gm10139O88245 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm10139O88245 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm10139O88245 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10139O88245 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Gm10139O88245 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Gm10139O88245 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC10.51□□□□□ -0.73
Gm10139O88245 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Gm10139O88245 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm10139O88245 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Gm10139O88245 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm10139O88245 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm10139O88245 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm10139O88245 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Gm10139O88245 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm10139O88245 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Gm10139O88245 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm10139O88245 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm10139O88245 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm10139O88245 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm10139O88245 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Gm10139O88245 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms