Protein–RNA interactions for Protein: O70479

Tnfaip1, BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip1O70479 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfaip1O70479 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.2■□□□□ 0.5
Tnfaip1O70479 Olfr129-201ENSMUST00000122318 993 ntBASIC18.2■□□□□ 0.5
Tnfaip1O70479 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.2■□□□□ 0.5
Tnfaip1O70479 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfaip1O70479 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfaip1O70479 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfaip1O70479 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfaip1O70479 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfaip1O70479 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfaip1O70479 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.2■□□□□ 0.5
Tnfaip1O70479 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfaip1O70479 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Tnfaip1O70479 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfaip1O70479 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Gm28659-201ENSMUST00000188013 759 ntBASIC18.19■□□□□ 0.5
Tnfaip1O70479 Gm34391-201ENSMUST00000203706 907 ntBASIC18.19■□□□□ 0.5
Tnfaip1O70479 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.19■□□□□ 0.5
Tnfaip1O70479 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip1O70479 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.18■□□□□ 0.5
Tnfaip1O70479 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.18■□□□□ 0.5
Tnfaip1O70479 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Birc2-201ENSMUST00000054878 378 ntBASIC18.18■□□□□ 0.5
Tnfaip1O70479 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip1O70479 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfaip1O70479 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tnfaip1O70479 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfaip1O70479 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfaip1O70479 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Tnfaip1O70479 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfaip1O70479 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.17■□□□□ 0.5
Tnfaip1O70479 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.17■□□□□ 0.5
Tnfaip1O70479 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.17■□□□□ 0.5
Tnfaip1O70479 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfaip1O70479 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfaip1O70479 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.17■□□□□ 0.5
Tnfaip1O70479 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Tnfaip1O70479 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Gm15794-201ENSMUST00000120182 631 ntBASIC18.16■□□□□ 0.5
Tnfaip1O70479 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.16■□□□□ 0.5
Tnfaip1O70479 Fst-202ENSMUST00000223640 2612 ntBASIC18.16■□□□□ 0.5
Tnfaip1O70479 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip1O70479 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip1O70479 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Tnfaip1O70479 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.15■□□□□ 0.5
Tnfaip1O70479 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tnfaip1O70479 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip1O70479 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip1O70479 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip1O70479 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Tnfaip1O70479 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip1O70479 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip1O70479 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip1O70479 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip1O70479 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tnfaip1O70479 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Tnfaip1O70479 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tnfaip1O70479 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Tnfaip1O70479 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms