Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prom1O54990 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prom1O54990 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prom1O54990 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Prom1O54990 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prom1O54990 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prom1O54990 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.04■□□□□ 0.64
Prom1O54990 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prom1O54990 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Prom1O54990 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.04■□□□□ 0.64
Prom1O54990 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prom1O54990 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.04■□□□□ 0.64
Prom1O54990 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prom1O54990 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.04■□□□□ 0.64
Prom1O54990 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prom1O54990 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prom1O54990 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prom1O54990 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prom1O54990 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prom1O54990 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.04■□□□□ 0.64
Prom1O54990 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prom1O54990 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prom1O54990 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prom1O54990 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Prom1O54990 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prom1O54990 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prom1O54990 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.03■□□□□ 0.64
Prom1O54990 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prom1O54990 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prom1O54990 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prom1O54990 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prom1O54990 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prom1O54990 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Prom1O54990 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prom1O54990 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prom1O54990 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prom1O54990 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Prom1O54990 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prom1O54990 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prom1O54990 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prom1O54990 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prom1O54990 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prom1O54990 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prom1O54990 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prom1O54990 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prom1O54990 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prom1O54990 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prom1O54990 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.01■□□□□ 0.63
Prom1O54990 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prom1O54990 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prom1O54990 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.01■□□□□ 0.63
Prom1O54990 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prom1O54990 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prom1O54990 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prom1O54990 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prom1O54990 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Prom1O54990 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Prom1O54990 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prom1O54990 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prom1O54990 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Prom1O54990 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prom1O54990 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Prom1O54990 Gm27357-201ENSMUST00000183754 135 ntBASIC19■□□□□ 0.63
Prom1O54990 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19■□□□□ 0.63
Prom1O54990 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Prom1O54990 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prom1O54990 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Prom1O54990 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Prom1O54990 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prom1O54990 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prom1O54990 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prom1O54990 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prom1O54990 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.99■□□□□ 0.63
Prom1O54990 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.99■□□□□ 0.63
Prom1O54990 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prom1O54990 Gm7153-201ENSMUST00000117092 455 ntBASIC18.99■□□□□ 0.63
Prom1O54990 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prom1O54990 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prom1O54990 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prom1O54990 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Prom1O54990 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Prom1O54990 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prom1O54990 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prom1O54990 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.98■□□□□ 0.63
Prom1O54990 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.98■□□□□ 0.63
Prom1O54990 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.98■□□□□ 0.63
Prom1O54990 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms