Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Tnfsf12O54907 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.2□□□□□ -0.14
Tnfsf12O54907 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.2□□□□□ -0.14
Tnfsf12O54907 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Gm15375-201ENSMUST00000119510 849 ntBASIC14.2□□□□□ -0.14
Tnfsf12O54907 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfsf12O54907 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.2□□□□□ -0.14
Tnfsf12O54907 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf12O54907 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf12O54907 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf12O54907 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Tnfsf12O54907 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf12O54907 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tnfsf12O54907 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf12O54907 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf12O54907 Gm12527-201ENSMUST00000117967 564 ntBASIC14.19□□□□□ -0.14
Tnfsf12O54907 Gm13158-201ENSMUST00000122007 736 ntBASIC14.19□□□□□ -0.14
Tnfsf12O54907 Trmt13-210ENSMUST00000198454 880 ntBASIC14.19□□□□□ -0.14
Tnfsf12O54907 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf12O54907 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf12O54907 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Gm13401-201ENSMUST00000117074 291 ntBASIC14.18□□□□□ -0.14
Tnfsf12O54907 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.18□□□□□ -0.14
Tnfsf12O54907 Gm37856-201ENSMUST00000191634 999 ntBASIC14.18□□□□□ -0.14
Tnfsf12O54907 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.18□□□□□ -0.14
Tnfsf12O54907 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfsf12O54907 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfsf12O54907 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Tnfsf12O54907 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.17□□□□□ -0.14
Tnfsf12O54907 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Gm10418-201ENSMUST00000100943 576 ntBASIC14.17□□□□□ -0.14
Tnfsf12O54907 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tnfsf12O54907 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.17□□□□□ -0.14
Tnfsf12O54907 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfsf12O54907 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfsf12O54907 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfsf12O54907 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.16□□□□□ -0.14
Tnfsf12O54907 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.16□□□□□ -0.14
Tnfsf12O54907 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfsf12O54907 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfsf12O54907 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Tnfsf12O54907 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfsf12O54907 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms