Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
Matn3O35701 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.71■□□□□ 0.11
Matn3O35701 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Matn3O35701 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Matn3O35701 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Matn3O35701 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Matn3O35701 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Matn3O35701 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Matn3O35701 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Matn3O35701 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Matn3O35701 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Matn3O35701 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Matn3O35701 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Matn3O35701 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.71■□□□□ 0.1
Matn3O35701 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Matn3O35701 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Matn3O35701 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Matn3O35701 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Matn3O35701 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Matn3O35701 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Matn3O35701 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Matn3O35701 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Matn3O35701 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Matn3O35701 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.7■□□□□ 0.1
Matn3O35701 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.7■□□□□ 0.1
Matn3O35701 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.7■□□□□ 0.1
Matn3O35701 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Matn3O35701 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Matn3O35701 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Matn3O35701 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Matn3O35701 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Matn3O35701 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Matn3O35701 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Matn3O35701 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Matn3O35701 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Matn3O35701 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Matn3O35701 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Matn3O35701 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Matn3O35701 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Matn3O35701 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Matn3O35701 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Matn3O35701 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.69■□□□□ 0.1
Matn3O35701 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Matn3O35701 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Matn3O35701 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Matn3O35701 Mir8112-201ENSMUST00000184382 131 ntBASIC15.69■□□□□ 0.1
Matn3O35701 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.69■□□□□ 0.1
Matn3O35701 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.69■□□□□ 0.1
Matn3O35701 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Matn3O35701 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Matn3O35701 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Matn3O35701 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Matn3O35701 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Matn3O35701 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Matn3O35701 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Matn3O35701 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.68■□□□□ 0.1
Matn3O35701 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Matn3O35701 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Matn3O35701 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Matn3O35701 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Matn3O35701 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Matn3O35701 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Matn3O35701 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Matn3O35701 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Matn3O35701 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Matn3O35701 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Matn3O35701 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Matn3O35701 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Matn3O35701 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Matn3O35701 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Matn3O35701 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Matn3O35701 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Matn3O35701 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Matn3O35701 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Matn3O35701 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Matn3O35701 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Matn3O35701 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Matn3O35701 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Matn3O35701 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Matn3O35701 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms