Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Efnb3O35393 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Efnb3O35393 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Nespas-201ENSMUST00000143738 1083 ntBASIC13.66□□□□□ -0.22
Efnb3O35393 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Gm26571-201ENSMUST00000181399 666 ntBASIC13.66□□□□□ -0.22
Efnb3O35393 Gm7514-201ENSMUST00000209475 934 ntBASIC13.66□□□□□ -0.22
Efnb3O35393 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Efnb3O35393 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Efnb3O35393 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Efnb3O35393 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Efnb3O35393 Gm13216-201ENSMUST00000117145 591 ntBASIC13.65□□□□□ -0.22
Efnb3O35393 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.65□□□□□ -0.22
Efnb3O35393 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.65□□□□□ -0.22
Efnb3O35393 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.65□□□□□ -0.22
Efnb3O35393 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.65□□□□□ -0.22
Efnb3O35393 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Efnb3O35393 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Efnb3O35393 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Efnb3O35393 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.64□□□□□ -0.23
Efnb3O35393 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.64□□□□□ -0.23
Efnb3O35393 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Efnb3O35393 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Efnb3O35393 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.64□□□□□ -0.23
Efnb3O35393 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.64□□□□□ -0.23
Efnb3O35393 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Efnb3O35393 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.63□□□□□ -0.23
Efnb3O35393 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.63□□□□□ -0.23
Efnb3O35393 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.63□□□□□ -0.23
Efnb3O35393 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.63□□□□□ -0.23
Efnb3O35393 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Efnb3O35393 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.63□□□□□ -0.23
Efnb3O35393 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Efnb3O35393 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.62□□□□□ -0.23
Efnb3O35393 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Efnb3O35393 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Gm10418-201ENSMUST00000100943 576 ntBASIC13.62□□□□□ -0.23
Efnb3O35393 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Efnb3O35393 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Gm7291-201ENSMUST00000199147 382 ntBASIC13.62□□□□□ -0.23
Efnb3O35393 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.62□□□□□ -0.23
Efnb3O35393 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms