Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac1O09106 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac1O09106 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac1O09106 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac1O09106 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.56■□□□□ 0.88
Hdac1O09106 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.56■□□□□ 0.88
Hdac1O09106 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.56■□□□□ 0.88
Hdac1O09106 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Hdac1O09106 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac1O09106 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac1O09106 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac1O09106 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac1O09106 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac1O09106 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Hdac1O09106 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Hdac1O09106 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac1O09106 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac1O09106 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac1O09106 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Hdac1O09106 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.55■□□□□ 0.88
Hdac1O09106 Dio3-201ENSMUST00000097228 1449 ntBASIC20.55■□□□□ 0.88
Hdac1O09106 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Hdac1O09106 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac1O09106 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Hdac1O09106 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac1O09106 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.55■□□□□ 0.88
Hdac1O09106 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac1O09106 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac1O09106 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac1O09106 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac1O09106 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Hdac1O09106 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac1O09106 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac1O09106 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac1O09106 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac1O09106 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Hdac1O09106 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Hdac1O09106 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac1O09106 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Hdac1O09106 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac1O09106 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac1O09106 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac1O09106 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac1O09106 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.53■□□□□ 0.88
Hdac1O09106 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.53■□□□□ 0.88
Hdac1O09106 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.53■□□□□ 0.88
Hdac1O09106 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Hdac1O09106 Gm4968-201ENSMUST00000071458 858 ntBASIC20.53■□□□□ 0.88
Hdac1O09106 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac1O09106 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac1O09106 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Hdac1O09106 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.53■□□□□ 0.88
Hdac1O09106 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac1O09106 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac1O09106 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac1O09106 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.53■□□□□ 0.88
Hdac1O09106 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac1O09106 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.52■□□□□ 0.88
Hdac1O09106 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Hdac1O09106 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac1O09106 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Hdac1O09106 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac1O09106 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac1O09106 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.52■□□□□ 0.88
Hdac1O09106 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.52■□□□□ 0.88
Hdac1O09106 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.52■□□□□ 0.88
Hdac1O09106 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac1O09106 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac1O09106 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hdac1O09106 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hdac1O09106 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hdac1O09106 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac1O09106 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac1O09106 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac1O09106 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac1O09106 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac1O09106 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac1O09106 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Hdac1O09106 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac1O09106 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac1O09106 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac1O09106 Gm2559-201ENSMUST00000201323 363 ntBASIC20.51■□□□□ 0.87
Hdac1O09106 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.51■□□□□ 0.87
Hdac1O09106 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac1O09106 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Hdac1O09106 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac1O09106 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac1O09106 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac1O09106 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac1O09106 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac1O09106 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac1O09106 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac1O09106 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac1O09106 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Hdac1O09106 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac1O09106 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Hdac1O09106 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac1O09106 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac1O09106 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac1O09106 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms