Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trove2O08848 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Trove2O08848 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trove2O08848 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.72■□□□□ 0.43
Trove2O08848 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trove2O08848 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.72■□□□□ 0.43
Trove2O08848 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.72■□□□□ 0.43
Trove2O08848 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Trove2O08848 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trove2O08848 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Trove2O08848 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.72■□□□□ 0.43
Trove2O08848 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trove2O08848 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trove2O08848 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trove2O08848 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.71■□□□□ 0.43
Trove2O08848 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trove2O08848 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trove2O08848 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trove2O08848 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.71■□□□□ 0.43
Trove2O08848 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trove2O08848 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trove2O08848 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trove2O08848 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trove2O08848 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.71■□□□□ 0.43
Trove2O08848 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trove2O08848 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trove2O08848 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trove2O08848 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.71■□□□□ 0.42
Trove2O08848 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trove2O08848 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trove2O08848 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trove2O08848 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Trove2O08848 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trove2O08848 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trove2O08848 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trove2O08848 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trove2O08848 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trove2O08848 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trove2O08848 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trove2O08848 Gm7290-201ENSMUST00000104990 617 ntBASIC17.7■□□□□ 0.42
Trove2O08848 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.7■□□□□ 0.42
Trove2O08848 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trove2O08848 Gm12918-201ENSMUST00000120234 636 ntBASIC17.7■□□□□ 0.42
Trove2O08848 Gm15710-201ENSMUST00000121821 636 ntBASIC17.7■□□□□ 0.42
Trove2O08848 Gm5075-201ENSMUST00000196916 622 ntBASIC17.7■□□□□ 0.42
Trove2O08848 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.7■□□□□ 0.42
Trove2O08848 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.7■□□□□ 0.42
Trove2O08848 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trove2O08848 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.7■□□□□ 0.42
Trove2O08848 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.7■□□□□ 0.42
Trove2O08848 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Trove2O08848 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.7■□□□□ 0.42
Trove2O08848 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trove2O08848 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trove2O08848 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.7■□□□□ 0.42
Trove2O08848 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trove2O08848 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trove2O08848 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trove2O08848 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trove2O08848 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trove2O08848 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.69■□□□□ 0.42
Trove2O08848 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trove2O08848 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trove2O08848 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trove2O08848 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trove2O08848 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.69■□□□□ 0.42
Trove2O08848 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trove2O08848 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.69■□□□□ 0.42
Trove2O08848 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trove2O08848 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trove2O08848 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trove2O08848 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trove2O08848 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trove2O08848 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trove2O08848 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trove2O08848 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trove2O08848 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trove2O08848 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.68■□□□□ 0.42
Trove2O08848 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trove2O08848 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trove2O08848 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trove2O08848 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trove2O08848 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trove2O08848 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trove2O08848 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trove2O08848 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms