Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube3aO08759 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube3aO08759 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube3aO08759 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ube3aO08759 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Gm2399-201ENSMUST00000104944 225 ntBASIC18.67■□□□□ 0.58
Ube3aO08759 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.67■□□□□ 0.58
Ube3aO08759 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.67■□□□□ 0.58
Ube3aO08759 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube3aO08759 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ube3aO08759 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ube3aO08759 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ube3aO08759 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.66■□□□□ 0.58
Ube3aO08759 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.66■□□□□ 0.58
Ube3aO08759 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.66■□□□□ 0.58
Ube3aO08759 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.66■□□□□ 0.58
Ube3aO08759 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ube3aO08759 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ube3aO08759 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ube3aO08759 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube3aO08759 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ube3aO08759 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube3aO08759 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube3aO08759 Gm13216-201ENSMUST00000117145 591 ntBASIC18.65■□□□□ 0.58
Ube3aO08759 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.65■□□□□ 0.58
Ube3aO08759 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube3aO08759 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.65■□□□□ 0.58
Ube3aO08759 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ube3aO08759 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ube3aO08759 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ube3aO08759 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ube3aO08759 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ube3aO08759 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ube3aO08759 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ube3aO08759 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube3aO08759 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube3aO08759 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube3aO08759 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube3aO08759 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube3aO08759 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Ube3aO08759 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ube3aO08759 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ube3aO08759 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ube3aO08759 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube3aO08759 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ube3aO08759 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube3aO08759 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube3aO08759 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube3aO08759 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.64■□□□□ 0.57
Ube3aO08759 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube3aO08759 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube3aO08759 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube3aO08759 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ube3aO08759 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube3aO08759 Gm12933-201ENSMUST00000120203 872 ntBASIC18.63■□□□□ 0.57
Ube3aO08759 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.63■□□□□ 0.57
Ube3aO08759 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ube3aO08759 Zfp783-201ENSMUST00000095946 670 ntBASIC18.63■□□□□ 0.57
Ube3aO08759 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube3aO08759 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.63■□□□□ 0.57
Ube3aO08759 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube3aO08759 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube3aO08759 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ube3aO08759 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ube3aO08759 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Ube3aO08759 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.62■□□□□ 0.57
Ube3aO08759 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ube3aO08759 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms