Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Gm18025-201ENSMUST00000221733 862 ntBASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11bO08712 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Gm42545-201ENSMUST00000202755 922 ntBASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Gm20049-201ENSMUST00000219950 730 ntBASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11bO08712 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tnfrsf11bO08712 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11bO08712 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.52■□□□□ 0.4
Tnfrsf11bO08712 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf11bO08712 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Tnfrsf11bO08712 Gm12441-201ENSMUST00000121806 588 ntBASIC17.52■□□□□ 0.4
Tnfrsf11bO08712 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf11bO08712 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.52■□□□□ 0.4
Tnfrsf11bO08712 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfrsf11bO08712 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfrsf11bO08712 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfrsf11bO08712 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfrsf11bO08712 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11bO08712 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11bO08712 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf11bO08712 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf11bO08712 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11bO08712 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11bO08712 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11bO08712 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Tnfrsf11bO08712 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf11bO08712 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11bO08712 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11bO08712 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms