Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim34bJ3QNR8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim34bJ3QNR8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim34bJ3QNR8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim34bJ3QNR8 AC154471.1-201ENSMUST00000224418 436 ntBASIC21.13■□□□□ 0.97
Trim34bJ3QNR8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim34bJ3QNR8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.13■□□□□ 0.97
Trim34bJ3QNR8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim34bJ3QNR8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Trim34bJ3QNR8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim34bJ3QNR8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Trim34bJ3QNR8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trim34bJ3QNR8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim34bJ3QNR8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim34bJ3QNR8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Actl10-202ENSMUST00000226583 1501 ntBASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Gm29518-201ENSMUST00000190858 372 ntBASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim34bJ3QNR8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim34bJ3QNR8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 Gm17808-201ENSMUST00000200859 894 ntBASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Trim34bJ3QNR8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim34bJ3QNR8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim34bJ3QNR8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim34bJ3QNR8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim34bJ3QNR8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.08■□□□□ 0.97
Trim34bJ3QNR8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.08■□□□□ 0.97
Trim34bJ3QNR8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.08■□□□□ 0.97
Trim34bJ3QNR8 Gm27704-201ENSMUST00000185094 107 ntBASIC21.08■□□□□ 0.97
Trim34bJ3QNR8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim34bJ3QNR8 Ank2-226ENSMUST00000189368 339 ntBASIC21.08■□□□□ 0.97
Trim34bJ3QNR8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Trim34bJ3QNR8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim34bJ3QNR8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim34bJ3QNR8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim34bJ3QNR8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms