Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav13d-3J3QMG8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-3J3QMG8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-3J3QMG8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-3J3QMG8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-3J3QMG8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-3J3QMG8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-3J3QMG8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Gm12085-201ENSMUST00000119263 940 ntBASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-3J3QMG8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Gm10812-201ENSMUST00000099864 546 ntBASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-3J3QMG8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms