Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh1F7BJK1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh1F7BJK1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh1F7BJK1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Pcdh1F7BJK1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh1F7BJK1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh1F7BJK1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Pcdh1F7BJK1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh1F7BJK1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh1F7BJK1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh1F7BJK1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh1F7BJK1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh1F7BJK1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.52■□□□□ 0.07
Pcdh1F7BJK1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh1F7BJK1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pcdh1F7BJK1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh1F7BJK1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh1F7BJK1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh1F7BJK1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh1F7BJK1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Gm6211-202ENSMUST00000167849 925 ntBASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Gm27405-201ENSMUST00000184201 112 ntBASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Flg-201ENSMUST00000050758 1488 ntBASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh1F7BJK1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Gm7290-201ENSMUST00000104990 617 ntBASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Gm12918-201ENSMUST00000120234 636 ntBASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Gm15710-201ENSMUST00000121821 636 ntBASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Gm5075-201ENSMUST00000196916 622 ntBASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh1F7BJK1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms