Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Gm15378-201ENSMUST00000121894 207 ntBASIC17.74■□□□□ 0.43
Atf6F6VAN0 Gm10517-202ENSMUST00000192970 758 ntBASIC17.74■□□□□ 0.43
Atf6F6VAN0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6F6VAN0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6F6VAN0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Atf6F6VAN0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Gm13168-201ENSMUST00000121771 632 ntBASIC17.72■□□□□ 0.43
Atf6F6VAN0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Gm4974-201ENSMUST00000209974 875 ntBASIC17.72■□□□□ 0.43
Atf6F6VAN0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Atf6F6VAN0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.72■□□□□ 0.43
Atf6F6VAN0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Atf6F6VAN0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf6F6VAN0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf6F6VAN0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf6F6VAN0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Atf6F6VAN0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Atf6F6VAN0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf6F6VAN0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf6F6VAN0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.71■□□□□ 0.43
Atf6F6VAN0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Atf6F6VAN0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf6F6VAN0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Atf6F6VAN0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Atf6F6VAN0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
Atf6F6VAN0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6F6VAN0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6F6VAN0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6F6VAN0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.69■□□□□ 0.42
Atf6F6VAN0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.69■□□□□ 0.42
Atf6F6VAN0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.69■□□□□ 0.42
Atf6F6VAN0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms