Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.27■□□□□ 0.04
Dchs1E9PVD3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Dchs1E9PVD3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Dchs1E9PVD3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Dchs1E9PVD3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Dchs1E9PVD3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Gm4974-201ENSMUST00000209974 875 ntBASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.27■□□□□ 0.03
Dchs1E9PVD3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.27■□□□□ 0.03
Dchs1E9PVD3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Gm26039-201ENSMUST00000158152 144 ntBASIC15.26■□□□□ 0.03
Dchs1E9PVD3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.26■□□□□ 0.03
Dchs1E9PVD3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Dchs1E9PVD3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Gm10418-201ENSMUST00000100943 576 ntBASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.25■□□□□ 0.03
Dchs1E9PVD3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dchs1E9PVD3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dchs1E9PVD3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Rps4l-201ENSMUST00000071745 943 ntBASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.23■□□□□ 0.03
Dchs1E9PVD3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms