Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Gm45328-201ENSMUST00000210942 917 ntBASIC15.41■□□□□ 0.06
Shank1D3YZU1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Shank1D3YZU1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shank1D3YZU1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.4■□□□□ 0.06
Shank1D3YZU1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shank1D3YZU1 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.39■□□□□ 0.06
Shank1D3YZU1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Gm43347-201ENSMUST00000200226 580 ntBASIC15.39■□□□□ 0.05
Shank1D3YZU1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Tgds-204ENSMUST00000228543 1594 ntBASIC15.39■□□□□ 0.05
Shank1D3YZU1 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.39■□□□□ 0.05
Shank1D3YZU1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shank1D3YZU1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Shank1D3YZU1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shank1D3YZU1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shank1D3YZU1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.38■□□□□ 0.05
Shank1D3YZU1 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.38■□□□□ 0.05
Shank1D3YZU1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shank1D3YZU1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Gm6623-201ENSMUST00000173570 544 ntBASIC15.37■□□□□ 0.05
Shank1D3YZU1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Shank1D3YZU1 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.37■□□□□ 0.05
Shank1D3YZU1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms