Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.04□□□□□ -0.32
Col6a5A6H584 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
Col6a5A6H584 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a5A6H584 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a5A6H584 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.04□□□□□ -0.32
Col6a5A6H584 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a5A6H584 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Col6a5A6H584 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a5A6H584 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a5A6H584 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a5A6H584 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a5A6H584 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a5A6H584 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a5A6H584 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a5A6H584 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a5A6H584 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col6a5A6H584 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a5A6H584 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col6a5A6H584 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a5A6H584 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col6a5A6H584 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Col6a5A6H584 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a5A6H584 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a5A6H584 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a5A6H584 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.03□□□□□ -0.32
Col6a5A6H584 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.03□□□□□ -0.32
Col6a5A6H584 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.03□□□□□ -0.32
Col6a5A6H584 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.03□□□□□ -0.32
Col6a5A6H584 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a5A6H584 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.03□□□□□ -0.32
Col6a5A6H584 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a5A6H584 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a5A6H584 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a5A6H584 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Col6a5A6H584 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.03□□□□□ -0.32
Col6a5A6H584 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a5A6H584 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a5A6H584 Gm5745-201ENSMUST00000183748 313 ntBASIC13.03□□□□□ -0.32
Col6a5A6H584 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a5A6H584 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a5A6H584 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a5A6H584 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a5A6H584 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Col6a5A6H584 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.02□□□□□ -0.32
Col6a5A6H584 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a5A6H584 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.02□□□□□ -0.32
Col6a5A6H584 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a5A6H584 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a5A6H584 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a5A6H584 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a5A6H584 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a5A6H584 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.02□□□□□ -0.33
Col6a5A6H584 Gm15173-201ENSMUST00000122049 433 ntBASIC13.02□□□□□ -0.33
Col6a5A6H584 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.02□□□□□ -0.33
Col6a5A6H584 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a5A6H584 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a5A6H584 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a5A6H584 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a5A6H584 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a5A6H584 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col6a5A6H584 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a5A6H584 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a5A6H584 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a5A6H584 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col6a5A6H584 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Col6a5A6H584 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col6a5A6H584 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Gm6089-201ENSMUST00000197666 938 ntBASIC13.01□□□□□ -0.33
Col6a5A6H584 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Col6a5A6H584 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col6a5A6H584 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col6a5A6H584 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Gm38160-201ENSMUST00000193090 2499 ntBASIC13.01□□□□□ -0.33
Col6a5A6H584 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.01□□□□□ -0.33
Col6a5A6H584 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.01□□□□□ -0.33
Col6a5A6H584 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a5A6H584 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13□□□□□ -0.33
Col6a5A6H584 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col6a5A6H584 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a5A6H584 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms