Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-1A0N8R0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.9□□□□□ -0.19
Trav12d-1A0N8R0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trav12d-1A0N8R0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Gm11643-201ENSMUST00000119578 864 ntBASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav12d-1A0N8R0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-1A0N8R0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-1A0N8R0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms