Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Idnk-204ENSMUST00000226010 1898 ntBASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trbv17A0A140T8P8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Mir6349-201ENSMUST00000184059 97 ntBASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv17A0A140T8P8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Gm13168-201ENSMUST00000121771 632 ntBASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Gm29791-202ENSMUST00000207888 369 ntBASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trbv17A0A140T8P8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv17A0A140T8P8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv17A0A140T8P8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv17A0A140T8P8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv17A0A140T8P8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv17A0A140T8P8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv17A0A140T8P8 Gm10418-201ENSMUST00000100943 576 ntBASIC13.21□□□□□ -0.29
Trbv17A0A140T8P8 Gm5643-201ENSMUST00000117081 966 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms