Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm10129-202ENSMUST00000193100 1316 ntBASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv1-88A0A140T8N1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC11.42□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm10655-201ENSMUST00000098658 1397 ntBASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Idnk-204ENSMUST00000226010 1898 ntBASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv1-88A0A140T8N1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm37563-201ENSMUST00000192580 1513 ntBASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms