Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Gm42569-201ENSMUST00000200539 472 ntBASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Fcho2-208ENSMUST00000224992 2964 ntBASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Gm6365-201ENSMUST00000054711 744 ntBASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv3-5A0A140T8M6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Gm37194-201ENSMUST00000193092 3031 ntBASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv3-5A0A140T8M6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Igkv3-5A0A140T8M6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-5A0A140T8M6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-5A0A140T8M6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-5A0A140T8M6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms