Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Gm7063-201ENSMUST00000186840 981 ntBASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Frmpd3A0A140LIW3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Frmpd3A0A140LIW3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Frmpd3A0A140LIW3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Frmpd3A0A140LIW3 Gm15165-201ENSMUST00000118140 502 ntBASIC20.56■□□□□ 0.88
Frmpd3A0A140LIW3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Frmpd3A0A140LIW3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Frmpd3A0A140LIW3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Frmpd3A0A140LIW3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Frmpd3A0A140LIW3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Frmpd3A0A140LIW3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.54■□□□□ 0.88
Frmpd3A0A140LIW3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.54■□□□□ 0.88
Frmpd3A0A140LIW3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Frmpd3A0A140LIW3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.54■□□□□ 0.88
Frmpd3A0A140LIW3 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.54■□□□□ 0.88
Frmpd3A0A140LIW3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Frmpd3A0A140LIW3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Frmpd3A0A140LIW3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Frmpd3A0A140LIW3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.54■□□□□ 0.88
Frmpd3A0A140LIW3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Frmpd3A0A140LIW3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Frmpd3A0A140LIW3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Frmpd3A0A140LIW3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Frmpd3A0A140LIW3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Frmpd3A0A140LIW3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Frmpd3A0A140LIW3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Frmpd3A0A140LIW3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.53■□□□□ 0.88
Frmpd3A0A140LIW3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Frmpd3A0A140LIW3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Frmpd3A0A140LIW3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.53■□□□□ 0.88
Frmpd3A0A140LIW3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Frmpd3A0A140LIW3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Frmpd3A0A140LIW3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Frmpd3A0A140LIW3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Frmpd3A0A140LIW3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Frmpd3A0A140LIW3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.52■□□□□ 0.88
Frmpd3A0A140LIW3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Frmpd3A0A140LIW3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Frmpd3A0A140LIW3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Frmpd3A0A140LIW3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Frmpd3A0A140LIW3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Frmpd3A0A140LIW3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Psmb5-202ENSMUST00000227257 622 ntBASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Gm2213-201ENSMUST00000197485 688 ntBASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frmpd3A0A140LIW3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Frmpd3A0A140LIW3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Frmpd3A0A140LIW3 Gm23935-201ENSMUST00000102303 57 ntBASIC20.5■□□□□ 0.87
Frmpd3A0A140LIW3 Gm24270-201ENSMUST00000102326 57 ntBASIC20.5■□□□□ 0.87
Frmpd3A0A140LIW3 Gm24245-201ENSMUST00000157318 57 ntBASIC20.5■□□□□ 0.87
Frmpd3A0A140LIW3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms