Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm26917-202ENSMUST00000192833 3329 ntBASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm45244-201ENSMUST00000211328 2200 ntBASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm6365-201ENSMUST00000054711 744 ntBASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-4A0A0G2JFX3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms