Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.52□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm15565-201ENSMUST00000118890 427 ntBASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Mir2861-201ENSMUST00000175539 82 ntBASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm13836-201ENSMUST00000121159 501 ntBASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms