Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Gm38345-201ENSMUST00000192635 1748 ntBASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Spcs1-204ENSMUST00000226782 949 ntBASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-28A0A0G2JE47 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Igkv8-28A0A0G2JE47 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Gm44544-201ENSMUST00000207052 1844 ntBASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Gm37563-201ENSMUST00000192580 1513 ntBASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-28A0A0G2JE47 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Mir7075-201ENSMUST00000184187 82 ntBASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-28A0A0G2JE47 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-28A0A0G2JE47 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-28A0A0G2JE47 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-28A0A0G2JE47 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-28A0A0G2JE47 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Igkv8-28A0A0G2JE47 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-28A0A0G2JE47 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-28A0A0G2JE47 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-28A0A0G2JE47 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-28A0A0G2JE47 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-28A0A0G2JE47 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Igkv8-28A0A0G2JE47 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms