Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.93□□□□□ -0.18
Trbv5A0A0B4J1G9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Gm13241-201ENSMUST00000094493 780 ntBASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv5A0A0B4J1G9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv5A0A0B4J1G9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms