Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm13401-201ENSMUST00000117074 291 ntBASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Mir5122-201ENSMUST00000175004 89 ntBASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbc1A0A0A6YWV4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm10517-202ENSMUST00000192970 758 ntBASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbc1A0A0A6YWV4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbc1A0A0A6YWV4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbc1A0A0A6YWV4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Trbc1A0A0A6YWV4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Trbc1A0A0A6YWV4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbc1A0A0A6YWV4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbc1A0A0A6YWV4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm4974-201ENSMUST00000209974 875 ntBASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 Timm23-208ENSMUST00000226683 750 ntBASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trbc1A0A0A6YWV4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Idnk-204ENSMUST00000226010 1898 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms