Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv23A0A0A6YWQ1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv23A0A0A6YWQ1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv23A0A0A6YWQ1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv23A0A0A6YWQ1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv23A0A0A6YWQ1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trbv23A0A0A6YWQ1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Trbv23A0A0A6YWQ1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Gm37179-201ENSMUST00000194862 823 ntBASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv23A0A0A6YWQ1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv23A0A0A6YWQ1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv23A0A0A6YWQ1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv23A0A0A6YWQ1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.83□□□□□ -0.03
Trbv23A0A0A6YWQ1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv23A0A0A6YWQ1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv23A0A0A6YWQ1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv23A0A0A6YWQ1 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.83□□□□□ -0.03
Trbv23A0A0A6YWQ1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv23A0A0A6YWQ1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms