Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-3A0A075B6A4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Mir8112-201ENSMUST00000184382 131 ntBASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12d-3A0A075B6A4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Gm7417-201ENSMUST00000192950 473 ntBASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav12d-3A0A075B6A4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms