Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Gm11927-201ENSMUST00000118472 759 ntBASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-1A0A075B699 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.33□□□□□ -0.27
Trav9d-1A0A075B699 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav9d-1A0A075B699 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav9d-1A0A075B699 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Mir2861-201ENSMUST00000175539 82 ntBASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-1A0A075B699 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Gm13401-201ENSMUST00000117074 291 ntBASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Mir8112-201ENSMUST00000184382 131 ntBASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Gm37179-201ENSMUST00000194862 823 ntBASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-1A0A075B699 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms