Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9d-3A0A075B695 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav9d-3A0A075B695 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Gm12441-201ENSMUST00000121806 588 ntBASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Mir2861-201ENSMUST00000175539 82 ntBASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Gm27275-201ENSMUST00000184318 272 ntBASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Gm10138-203ENSMUST00000206952 366 ntBASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9d-3A0A075B695 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Gm11249-201ENSMUST00000117071 859 ntBASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-3A0A075B695 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Gm15375-201ENSMUST00000119510 849 ntBASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Gm29257-201ENSMUST00000186115 639 ntBASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-3A0A075B695 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-3A0A075B695 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-3A0A075B695 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-3A0A075B695 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav9d-3A0A075B695 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-3A0A075B695 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav9d-3A0A075B695 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms