Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-4A0A075B654 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 AC121961.1-201ENSMUST00000218594 1779 ntBASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Krt8-ps-201ENSMUST00000208495 945 ntBASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav3-4A0A075B654 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-4A0A075B654 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Gm8770-201ENSMUST00000121113 1109 ntBASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms