Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.39□□□□□ -0.27
Trav16A0A075B653 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav16A0A075B653 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.38□□□□□ -0.27
Trav16A0A075B653 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav16A0A075B653 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.37□□□□□ -0.27
Trav16A0A075B653 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav16A0A075B653 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav16A0A075B653 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav16A0A075B653 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav16A0A075B653 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16A0A075B653 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms