Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Trav13-2A0A075B649 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13-2A0A075B649 Gm37563-201ENSMUST00000192580 1513 ntBASIC11.65□□□□□ -0.55
Trav13-2A0A075B649 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13-2A0A075B649 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trav13-2A0A075B649 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Gm43808-201ENSMUST00000202534 2065 ntBASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Ddx41-204ENSMUST00000224765 2199 ntBASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Gm13234-201ENSMUST00000120010 747 ntBASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-2A0A075B649 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Gm43672-201ENSMUST00000199072 1731 ntBASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Nespas-201ENSMUST00000143738 1083 ntBASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-2A0A075B649 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Gm42778-201ENSMUST00000199644 553 ntBASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-2A0A075B649 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms