Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-4A0A075B631 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav9n-4A0A075B631 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-4A0A075B631 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9n-4A0A075B631 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav9n-4A0A075B631 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav9n-4A0A075B631 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav9n-4A0A075B631 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav9n-4A0A075B631 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC11.83□□□□□ -0.51
Trav9n-4A0A075B631 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav9n-4A0A075B631 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav9n-4A0A075B631 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Gm43808-201ENSMUST00000202534 2065 ntBASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9n-4A0A075B631 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Gm43294-201ENSMUST00000202850 2490 ntBASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Gm43338-201ENSMUST00000198617 2223 ntBASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Rab3c-203ENSMUST00000224180 967 ntBASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-4A0A075B631 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Gm13148-201ENSMUST00000118892 745 ntBASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Gm27405-201ENSMUST00000184201 112 ntBASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Gm26524-201ENSMUST00000192339 390 ntBASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Gm5408-201ENSMUST00000197998 747 ntBASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms