Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.64□□□□□ -1.67
Msx2Q03358 Gm10916-201ENSMUST00000080330 483 ntBASIC4.64□□□□□ -1.67
Msx2Q03358 mt-Ti-201ENSMUST00000082393 69 ntBASIC4.64□□□□□ -1.67
Msx2Q03358 Gm25482-201ENSMUST00000083225 107 ntBASIC4.64□□□□□ -1.67
Msx2Q03358 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Msx2Q03358 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.64□□□□□ -1.67
Msx2Q03358 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.64□□□□□ -1.67
Msx2Q03358 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Msx2Q03358 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.64□□□□□ -1.67
Msx2Q03358 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Msx2Q03358 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
Msx2Q03358 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Msx2Q03358 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Msx2Q03358 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Msx2Q03358 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Msx2Q03358 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm26067-201ENSMUST00000103789 110 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Msx2Q03358 Gm11912-201ENSMUST00000117235 264 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm15844-201ENSMUST00000118016 576 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm15195-201ENSMUST00000118775 263 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm7219-201ENSMUST00000119619 297 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm12074-201ENSMUST00000120189 219 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Mir1970-201ENSMUST00000157839 104 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm24931-201ENSMUST00000158324 107 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm24546-201ENSMUST00000158652 102 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm23704-201ENSMUST00000158844 340 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Msx2Q03358 Gm17528-201ENSMUST00000171026 239 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Mir6355-201ENSMUST00000183687 106 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Mir6393-201ENSMUST00000183709 94 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm45678-201ENSMUST00000210509 295 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm45252-201ENSMUST00000211579 397 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 AC154616.2-201ENSMUST00000227978 398 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Gm25821-201ENSMUST00000093657 133 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Msx2Q03358 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Msx2Q03358 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Msx2Q03358 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
Msx2Q03358 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Msx2Q03358 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.63□□□□□ -1.67
Msx2Q03358 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Msx2Q03358 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Msx2Q03358 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Msx2Q03358 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Msx2Q03358 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Msx2Q03358 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Msx2Q03358 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Msx2Q03358 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
Msx2Q03358 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Msx2Q03358 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Gm12564-201ENSMUST00000119860 321 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Gm13239-201ENSMUST00000119920 637 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Gm23901-201ENSMUST00000157570 107 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Gm23902-201ENSMUST00000157571 134 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Gm20401-201ENSMUST00000173717 212 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Gm29668-201ENSMUST00000187802 315 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.62□□□□□ -1.67
Msx2Q03358 Gm37029-201ENSMUST00000195773 239 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Gm42579-201ENSMUST00000200512 734 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Gm45005-201ENSMUST00000206640 157 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Gm45119-201ENSMUST00000207612 199 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.62□□□□□ -1.67
Msx2Q03358 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Gm18442-201ENSMUST00000220925 639 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 CT030166.2-201ENSMUST00000222021 368 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Msx2Q03358 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Msx2Q03358 Snora44-201ENSMUST00000082670 129 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Gm22577-201ENSMUST00000083731 109 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.62□□□□□ -1.67
Msx2Q03358 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
Msx2Q03358 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Msx2Q03358 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Msx2Q03358 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Msx2Q03358 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.61□□□□□ -1.67
Msx2Q03358 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Msx2Q03358 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Msx2Q03358 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.61□□□□□ -1.67
Msx2Q03358 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Msx2Q03358 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Msx2Q03358 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Msx2Q03358 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.61□□□□□ -1.67
Msx2Q03358 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Msx2Q03358 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Msx2Q03358 Gm14220-201ENSMUST00000118114 449 ntBASIC4.61□□□□□ -1.67
Msx2Q03358 Gm14792-201ENSMUST00000119725 258 ntBASIC4.61□□□□□ -1.67
Msx2Q03358 Gm14175-201ENSMUST00000119835 241 ntBASIC4.61□□□□□ -1.67
Msx2Q03358 Gm14101-201ENSMUST00000121502 473 ntBASIC4.61□□□□□ -1.67
Msx2Q03358 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.61□□□□□ -1.67
Msx2Q03358 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms