Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm28939-201ENSMUST00000190351 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29479-201ENSMUST00000190352 455 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28223-201ENSMUST00000190469 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29575-201ENSMUST00000190597 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29092-201ENSMUST00000190768 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29469-201ENSMUST00000191448 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm38044-201ENSMUST00000192964 487 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm38183-201ENSMUST00000193189 205 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm44513-201ENSMUST00000206811 439 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm45730-201ENSMUST00000212560 395 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 AC158606.1-201ENSMUST00000220078 325 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Snora23-201ENSMUST00000082517 184 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col8a1Q00780 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col8a1Q00780 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.15□□□□□ -1.74
Col8a1Q00780 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.15□□□□□ -1.74
Col8a1Q00780 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.74
Col8a1Q00780 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.74
Col8a1Q00780 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Col8a1Q00780 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.15□□□□□ -1.74
Col8a1Q00780 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
Col8a1Q00780 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Col8a1Q00780 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Col8a1Q00780 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Col8a1Q00780 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col8a1Q00780 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Col8a1Q00780 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm23424-201ENSMUST00000103889 110 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm11486-201ENSMUST00000107322 478 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm13550-201ENSMUST00000118185 525 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm12042-201ENSMUST00000120479 301 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm6565-201ENSMUST00000121217 438 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm13232-201ENSMUST00000121816 632 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm2182-201ENSMUST00000145243 663 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm26101-201ENSMUST00000157246 105 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm25156-201ENSMUST00000179809 79 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm27528-201ENSMUST00000183544 205 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm27490-201ENSMUST00000184754 128 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm37030-201ENSMUST00000194254 295 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm9722-201ENSMUST00000194568 802 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm44871-201ENSMUST00000207821 497 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm18016-201ENSMUST00000216119 801 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm7540-201ENSMUST00000219764 926 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.15□□□□□ -1.75
Col8a1Q00780 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm2710-201ENSMUST00000073196 603 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Mir323-201ENSMUST00000083683 86 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Gm6361-201ENSMUST00000091031 435 ntBASIC4.15□□□□□ -1.75
Col8a1Q00780 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
Col8a1Q00780 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col8a1Q00780 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.15□□□□□ -1.75
Col8a1Q00780 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Col8a1Q00780 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
Col8a1Q00780 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col8a1Q00780 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.15□□□□□ -1.75
Col8a1Q00780 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
Col8a1Q00780 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm37244-201ENSMUST00000191748 1981 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col8a1Q00780 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col8a1Q00780 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm23481-201ENSMUST00000104173 131 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm13122-201ENSMUST00000118380 453 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm14541-201ENSMUST00000118985 157 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm12231-201ENSMUST00000119447 695 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm13973-201ENSMUST00000121371 894 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm14765-201ENSMUST00000121954 326 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm22219-201ENSMUST00000157562 319 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm25861-201ENSMUST00000158251 109 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm20428-201ENSMUST00000174365 283 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.14□□□□□ -1.75
Col8a1Q00780 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm22259-201ENSMUST00000178926 107 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm27165-201ENSMUST00000183951 232 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm43286-201ENSMUST00000197420 424 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC4.14□□□□□ -1.75
Col8a1Q00780 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms