Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm8288-201ENSMUST00000223406 593 ntBASIC5.09□□□□□ -1.59
Sox1P53783 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.09□□□□□ -1.59
Sox1P53783 AC158982.2-201ENSMUST00000226283 184 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Sox1P53783 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Sox1P53783 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Sox1P53783 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Sox1P53783 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Sox1P53783 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Sox1P53783 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Sox1P53783 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.09□□□□□ -1.6
Sox1P53783 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Sox1P53783 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sox1P53783 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox1P53783 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sox1P53783 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sox1P53783 Gm15012-201ENSMUST00000119176 106 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Gm12564-201ENSMUST00000119860 321 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Gm12897-201ENSMUST00000120341 250 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Gm7327-201ENSMUST00000120925 652 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Gm15786-201ENSMUST00000121079 450 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Gm11849-201ENSMUST00000121293 261 ntBASIC5.08□□□□□ -1.6
Sox1P53783 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sox1P53783 Gm24998-201ENSMUST00000157908 89 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Gm23545-201ENSMUST00000158205 104 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Gm17153-201ENSMUST00000171314 490 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Gm29350-201ENSMUST00000189141 541 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Mir129b-201ENSMUST00000197461 65 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 Gm45007-201ENSMUST00000206237 366 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Gm45313-201ENSMUST00000210584 178 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Gm29884-201ENSMUST00000218403 453 ntBASIC5.08□□□□□ -1.6
Sox1P53783 AC151833.1-201ENSMUST00000227752 574 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Gm24031-201ENSMUST00000083930 131 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sox1P53783 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Sox1P53783 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.08□□□□□ -1.6
Sox1P53783 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox1P53783 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox1P53783 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.08□□□□□ -1.6
Sox1P53783 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox1P53783 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox1P53783 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sox1P53783 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sox1P53783 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.07□□□□□ -1.6
Sox1P53783 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 Gm11430-201ENSMUST00000121317 217 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 Gm17109-201ENSMUST00000163985 358 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Gm4761-201ENSMUST00000178086 582 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Gm24863-201ENSMUST00000179499 107 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Mir6393-201ENSMUST00000183709 94 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Gm27773-201ENSMUST00000184087 78 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Gm38040-201ENSMUST00000193505 225 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 Gm44016-201ENSMUST00000203463 164 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Gm44475-201ENSMUST00000204041 424 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Gm8132-201ENSMUST00000204938 640 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sox1P53783 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 AC173482.4-201ENSMUST00000225096 348 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox1P53783 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sox1P53783 Snora23-201ENSMUST00000082517 184 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Gm22169-201ENSMUST00000083229 107 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Gm23455-201ENSMUST00000083331 100 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Gm5670-201ENSMUST00000093546 372 ntBASIC5.07□□□□□ -1.6
Sox1P53783 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox1P53783 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sox1P53783 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox1P53783 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms