Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.7□□□□□ -1.66
Msx2Q03358 Gm43501-201ENSMUST00000202513 107 ntBASIC4.7□□□□□ -1.66
Msx2Q03358 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.7□□□□□ -1.66
Msx2Q03358 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Msx2Q03358 Gm21937-201ENSMUST00000222825 218 ntBASIC4.7□□□□□ -1.66
Msx2Q03358 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.7□□□□□ -1.66
Msx2Q03358 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Msx2Q03358 Gm10237-201ENSMUST00000078393 273 ntBASIC4.7□□□□□ -1.66
Msx2Q03358 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Msx2Q03358 Snora23-201ENSMUST00000082517 184 ntBASIC4.7□□□□□ -1.66
Msx2Q03358 Gm22740-201ENSMUST00000083439 109 ntBASIC4.7□□□□□ -1.66
Msx2Q03358 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Msx2Q03358 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Msx2Q03358 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Msx2Q03358 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Msx2Q03358 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Msx2Q03358 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Msx2Q03358 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Msx2Q03358 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Msx2Q03358 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Msx2Q03358 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Msx2Q03358 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Msx2Q03358 Gm24429-201ENSMUST00000104076 132 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm24170-201ENSMUST00000104124 133 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm14622-201ENSMUST00000117117 468 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm6134-201ENSMUST00000117265 171 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm12782-201ENSMUST00000117519 727 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm14774-201ENSMUST00000117857 536 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm14652-201ENSMUST00000118479 235 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Mup-ps28-201ENSMUST00000120686 289 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.69□□□□□ -1.66
Msx2Q03358 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.69□□□□□ -1.66
Msx2Q03358 Gm24914-201ENSMUST00000157285 313 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm22219-201ENSMUST00000157562 319 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm7609-204ENSMUST00000161424 461 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Msx2Q03358 Gm7958-201ENSMUST00000178255 468 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm10784-201ENSMUST00000178715 238 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm7950-201ENSMUST00000179633 468 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm24464-201ENSMUST00000179697 107 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Mir7653-201ENSMUST00000184358 61 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Mir7674-201ENSMUST00000184964 63 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm29192-201ENSMUST00000190942 377 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.69□□□□□ -1.66
Msx2Q03358 Gm9722-201ENSMUST00000194568 802 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm8874-201ENSMUST00000196826 286 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC4.69□□□□□ -1.66
Msx2Q03358 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Msx2Q03358 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Msx2Q03358 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Msx2Q03358 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Msx2Q03358 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Msx2Q03358 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.69□□□□□ -1.66
Msx2Q03358 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.69□□□□□ -1.66
Msx2Q03358 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Msx2Q03358 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Msx2Q03358 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Msx2Q03358 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Msx2Q03358 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Msx2Q03358 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Msx2Q03358 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm23193-201ENSMUST00000102427 82 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm24789-201ENSMUST00000104282 131 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm14570-201ENSMUST00000119444 391 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.68□□□□□ -1.66
Msx2Q03358 Gm23959-201ENSMUST00000157208 324 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm23669-201ENSMUST00000157470 128 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm26348-201ENSMUST00000157528 240 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm16557-201ENSMUST00000159182 191 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21842-201ENSMUST00000177552 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21626-201ENSMUST00000177791 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21562-201ENSMUST00000177888 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21539-201ENSMUST00000177925 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21599-201ENSMUST00000178249 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21914-201ENSMUST00000178452 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21723-201ENSMUST00000178692 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21916-201ENSMUST00000178771 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21801-201ENSMUST00000178865 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21633-201ENSMUST00000178941 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21821-201ENSMUST00000179646 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21588-201ENSMUST00000180074 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21780-201ENSMUST00000180128 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21572-201ENSMUST00000180134 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm21529-201ENSMUST00000180175 498 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm29031-201ENSMUST00000185316 614 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm29000-201ENSMUST00000185444 614 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm19637-201ENSMUST00000185933 579 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm28204-201ENSMUST00000185934 614 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm29484-201ENSMUST00000186067 324 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm28290-201ENSMUST00000186505 614 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm28161-201ENSMUST00000186669 614 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm29370-202ENSMUST00000187476 499 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm28468-201ENSMUST00000188536 615 ntBASIC4.68□□□□□ -1.66
Msx2Q03358 Gm28749-209ENSMUST00000189599 614 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms