Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.81□□□□□ -1.8
NcanP55066 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.81□□□□□ -1.8
NcanP55066 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NcanP55066 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NcanP55066 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.8□□□□□ -1.8
NcanP55066 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.8□□□□□ -1.8
NcanP55066 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NcanP55066 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
NcanP55066 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NcanP55066 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NcanP55066 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.8□□□□□ -1.8
NcanP55066 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.8□□□□□ -1.8
NcanP55066 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NcanP55066 Gm26377-201ENSMUST00000102184 108 ntBASIC3.8□□□□□ -1.8
NcanP55066 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NcanP55066 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NcanP55066 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NcanP55066 Gm15951-201ENSMUST00000118377 400 ntBASIC3.8□□□□□ -1.8
NcanP55066 Gm15403-201ENSMUST00000119343 1227 ntBASIC3.8□□□□□ -1.8
NcanP55066 Gm6373-201ENSMUST00000121026 360 ntBASIC3.8□□□□□ -1.8
NcanP55066 Gm23754-201ENSMUST00000157576 63 ntBASIC3.8□□□□□ -1.8
NcanP55066 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.8□□□□□ -1.8
NcanP55066 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.8□□□□□ -1.8
NcanP55066 Gm22910-201ENSMUST00000178568 132 ntBASIC3.8□□□□□ -1.8
NcanP55066 Gm6113-201ENSMUST00000180319 639 ntBASIC3.8□□□□□ -1.8
NcanP55066 Gm20574-201ENSMUST00000182867 917 ntBASIC3.8□□□□□ -1.8
NcanP55066 Mir6411-201ENSMUST00000183556 108 ntBASIC3.8□□□□□ -1.8
NcanP55066 Gm7870-201ENSMUST00000184467 616 ntBASIC3.8□□□□□ -1.8
NcanP55066 Gm29516-201ENSMUST00000190402 468 ntBASIC3.8□□□□□ -1.8
NcanP55066 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.8□□□□□ -1.8
NcanP55066 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NcanP55066 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.8□□□□□ -1.8
NcanP55066 Gm2676-201ENSMUST00000207279 606 ntBASIC3.8□□□□□ -1.8
NcanP55066 Gm45513-201ENSMUST00000210228 376 ntBASIC3.8□□□□□ -1.8
NcanP55066 Gm45400-201ENSMUST00000211603 653 ntBASIC3.8□□□□□ -1.8
NcanP55066 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.8□□□□□ -1.8
NcanP55066 AC150560.3-201ENSMUST00000227442 455 ntBASIC3.8□□□□□ -1.8
NcanP55066 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NcanP55066 Gm25131-201ENSMUST00000082653 151 ntBASIC3.8□□□□□ -1.8
NcanP55066 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC3.8□□□□□ -1.8
NcanP55066 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NcanP55066 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NcanP55066 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.8□□□□□ -1.8
NcanP55066 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NcanP55066 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
NcanP55066 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NcanP55066 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
NcanP55066 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NcanP55066 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.79□□□□□ -1.8
NcanP55066 AC113059.2-201ENSMUST00000213462 3016 ntBASIC3.79□□□□□ -1.8
NcanP55066 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NcanP55066 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.79□□□□□ -1.8
NcanP55066 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NcanP55066 Gm11576-201ENSMUST00000117433 417 ntBASIC3.79□□□□□ -1.8
NcanP55066 Gm15110-201ENSMUST00000117545 881 ntBASIC3.79□□□□□ -1.8
NcanP55066 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.79□□□□□ -1.8
NcanP55066 Gm22478-201ENSMUST00000122570 154 ntBASIC3.79□□□□□ -1.8
NcanP55066 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.79□□□□□ -1.8
NcanP55066 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
NcanP55066 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NcanP55066 Gm37288-201ENSMUST00000193963 334 ntBASIC3.79□□□□□ -1.8
NcanP55066 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NcanP55066 Gm25203-202ENSMUST00000200458 216 ntBASIC3.79□□□□□ -1.8
NcanP55066 Gm44688-201ENSMUST00000209083 537 ntBASIC3.79□□□□□ -1.8
NcanP55066 Gm7624-201ENSMUST00000209702 435 ntBASIC3.79□□□□□ -1.8
NcanP55066 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NcanP55066 Gm39147-201ENSMUST00000211376 465 ntBASIC3.79□□□□□ -1.8
NcanP55066 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.79□□□□□ -1.8
NcanP55066 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
NcanP55066 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.79□□□□□ -1.8
NcanP55066 Gm8274-201ENSMUST00000219820 463 ntBASIC3.79□□□□□ -1.8
NcanP55066 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.79□□□□□ -1.8
NcanP55066 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NcanP55066 Gm26449-201ENSMUST00000082452 104 ntBASIC3.79□□□□□ -1.8
NcanP55066 Gm25203-201ENSMUST00000082842 215 ntBASIC3.79□□□□□ -1.8
NcanP55066 Gm22829-201ENSMUST00000083771 106 ntBASIC3.79□□□□□ -1.8
NcanP55066 Mir465-201ENSMUST00000093563 74 ntBASIC3.79□□□□□ -1.8
NcanP55066 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.79□□□□□ -1.8
NcanP55066 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NcanP55066 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NcanP55066 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NcanP55066 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.79□□□□□ -1.8
NcanP55066 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NcanP55066 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NcanP55066 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.79□□□□□ -1.8
NcanP55066 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NcanP55066 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.78□□□□□ -1.8
NcanP55066 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NcanP55066 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NcanP55066 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.78□□□□□ -1.8
NcanP55066 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NcanP55066 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NcanP55066 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NcanP55066 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.78□□□□□ -1.8
NcanP55066 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NcanP55066 Mir344c-201ENSMUST00000103919 92 ntBASIC3.78□□□□□ -1.8
NcanP55066 Gm6429-201ENSMUST00000117144 475 ntBASIC3.78□□□□□ -1.8
NcanP55066 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.78□□□□□ -1.8
NcanP55066 Gm5762-201ENSMUST00000119204 258 ntBASIC3.78□□□□□ -1.8
NcanP55066 Gm11252-201ENSMUST00000120572 939 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms