Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm6501-201ENSMUST00000187178 916 ntBASIC3.16□□□□□ -1.9
Cpne8Q9DC53 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC3.16□□□□□ -1.9
Cpne8Q9DC53 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cpne8Q9DC53 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.16□□□□□ -1.9
Cpne8Q9DC53 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.16□□□□□ -1.9
Cpne8Q9DC53 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.16□□□□□ -1.9
Cpne8Q9DC53 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.16□□□□□ -1.9
Cpne8Q9DC53 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.16□□□□□ -1.9
Cpne8Q9DC53 Gm45409-201ENSMUST00000211486 252 ntBASIC3.16□□□□□ -1.9
Cpne8Q9DC53 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.16□□□□□ -1.9
Cpne8Q9DC53 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.16□□□□□ -1.9
Cpne8Q9DC53 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.16□□□□□ -1.9
Cpne8Q9DC53 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.16□□□□□ -1.9
Cpne8Q9DC53 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Cpne8Q9DC53 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.16□□□□□ -1.9
Cpne8Q9DC53 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cpne8Q9DC53 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.16□□□□□ -1.9
Cpne8Q9DC53 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.15□□□□□ -1.9
Cpne8Q9DC53 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.15□□□□□ -1.9
Cpne8Q9DC53 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cpne8Q9DC53 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm6274-201ENSMUST00000118173 797 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm24314-201ENSMUST00000158274 123 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm22764-201ENSMUST00000158370 92 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm29602-201ENSMUST00000186887 442 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm29524-201ENSMUST00000190819 699 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm32340-201ENSMUST00000192883 259 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm25203-202ENSMUST00000200458 216 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm43415-201ENSMUST00000201934 750 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm19244-201ENSMUST00000204340 253 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm43932-201ENSMUST00000204499 52 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC3.15□□□□□ -1.91
Cpne8Q9DC53 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm25203-201ENSMUST00000082842 215 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 AF357341-201ENSMUST00000083088 75 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.15□□□□□ -1.91
Cpne8Q9DC53 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm22590-201ENSMUST00000104247 128 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm12902-201ENSMUST00000118389 322 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm12105-201ENSMUST00000120846 779 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm23213-201ENSMUST00000122715 313 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm25555-201ENSMUST00000158078 111 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm5929-201ENSMUST00000166883 487 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm17204-201ENSMUST00000167936 478 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm21893-201ENSMUST00000179119 397 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm37007-201ENSMUST00000194234 319 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm45513-201ENSMUST00000210228 376 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm45380-201ENSMUST00000210465 315 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.14□□□□□ -1.91
Cpne8Q9DC53 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Cpne8Q9DC53 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm9845-201ENSMUST00000056409 598 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm26129-201ENSMUST00000082719 107 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.14□□□□□ -1.91
Cpne8Q9DC53 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.13□□□□□ -1.91
Cpne8Q9DC53 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Cpne8Q9DC53 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.13□□□□□ -1.91
Cpne8Q9DC53 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.13□□□□□ -1.91
Cpne8Q9DC53 Gm15799-201ENSMUST00000120899 289 ntBASIC3.13□□□□□ -1.91
Cpne8Q9DC53 Gm15733-201ENSMUST00000132957 242 ntBASIC3.13□□□□□ -1.91
Cpne8Q9DC53 Gm23205-201ENSMUST00000158671 103 ntBASIC3.13□□□□□ -1.91
Cpne8Q9DC53 Gm18520-201ENSMUST00000174783 658 ntBASIC3.13□□□□□ -1.91
Cpne8Q9DC53 Gm20672-201ENSMUST00000176605 261 ntBASIC3.13□□□□□ -1.91
Cpne8Q9DC53 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Cpne8Q9DC53 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms